PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ro02_G02277

Organism

Rubus occidentalis

Taxonomic ID

75079

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus

Family

bZIP

Protein Properties

Length: 532aa MW: 58231.5 Da PI: 7.0947

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ro02_G02277	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.9	1.4e-10	368	426	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i eLe kv++L++e ++L ++ +l+ + l+se+ Ro02_G02277 368 KRAKRILANRQSAARSKERKMRYIVELEHKVQTLQTEATTLSAQVTKLQRDSMGLTSEN 426 9***********************************************99998888887 PP

Sequence ? help Back to Top
Protein Sequence Length: 532 aa Download sequence
MEGSDETGSA KQRPNSTFGS SSSFPRPINH LDIPNFNSSQ IGLPMRQLSP SPSPENSKRP 60 GIPPSHPNNP MRPQLASWQN LSSGPSSHSR SLSQPSFFSL DSLPPLSPLT YREPSTSSLS 120 DPNSVDVSME ESVVNSHAQS LRSPVTDSNP FWAGDGLPPR RGHRRSNSDV PLGFSAVIQS 180 SPQLIPIGRR ASLDGKEKPV QLARQGSNGD GDGSEVMGDR KSGGEVVDDL FSAYMNLDNI 240 DKINSPGAGD KDLDSRASGS KTNGGESSDN EVESGLNGKW SKREGVKRAA GGDVGRTVRH 300 CRSVSMDSYM DNLNFDDELL KPLPPGTQVD GNSAKFSMEF GSGEFNAIEL KKIMESEKLS 360 EIAVSDPKRA KRILANRQSA ARSKERKMRY IVELEHKVQT LQTEATTLSA QVTKLQRDSM 420 GLTSENNELK FRLQAMEQQA QLKDALNEAL TGEVQRLRIS AAELGGEGNL SNRMSQQLSI 480 NQQMLQLQQL NLYQMQQQPQ HQAQQQIMQQ PQQNRLPSHQ QNGNAAKHES IQ

Sequence ? help Back to Top

Protein Sequence Length: 532 aa Download sequence

MEGSDETGSA KQRPNSTFGS SSSFPRPINH LDIPNFNSSQ IGLPMRQLSP SPSPENSKRP  60
GIPPSHPNNP MRPQLASWQN LSSGPSSHSR SLSQPSFFSL DSLPPLSPLT YREPSTSSLS  120
DPNSVDVSME ESVVNSHAQS LRSPVTDSNP FWAGDGLPPR RGHRRSNSDV PLGFSAVIQS  180
SPQLIPIGRR ASLDGKEKPV QLARQGSNGD GDGSEVMGDR KSGGEVVDDL FSAYMNLDNI  240
DKINSPGAGD KDLDSRASGS KTNGGESSDN EVESGLNGKW SKREGVKRAA GGDVGRTVRH  300
CRSVSMDSYM DNLNFDDELL KPLPPGTQVD GNSAKFSMEF GSGEFNAIEL KKIMESEKLS  360
EIAVSDPKRA KRILANRQSA ARSKERKMRY IVELEHKVQT LQTEATTLSA QVTKLQRDSM  420
GLTSENNELK FRLQAMEQQA QLKDALNEAL TGEVQRLRIS AAELGGEGNL SNRMSQQLSI  480
NQQMLQLQQL NLYQMQQQPQ HQAQQQIMQQ PQQNRLPSHQ QNGNAAKHES IQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38900.3	1e-115	bZIP family protein