PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro02_G02326
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 165aa    MW: 18859.9 Da    PI: 6.8048
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro02_G02326genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.43.7e-142884561
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61
                 ++ +r+q+NRe+ArrsR RK++ ++ L+  v +L +eN++    ++  ++++ ++++
  Ro02_G02326 28 RKRKRMQSNRESARRSRMRKQQHLDDLTAQVTQLRKENSQILTSINITNQHYINVEA 84
                 6789***********************************999888887777766655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MASSSGNSSG STQLQMNSGS EEELQHQRKR KRMQSNRESA RRSRMRKQQH LDDLTAQVTQ  60
LRKENSQILT SINITNQHYI NVEAENLVLK AQMAELSQRL DSLTEILNFI NDNNNNHNGV  120
FETEPAQLLQ TGSTAADHYS FMMNPWNNLL HVNQPIMATA DMLQY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14148RRSRMRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.11e-44bZIP family protein