PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro02_G02365
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family MYB_related
Protein Properties Length: 103aa    MW: 11567.9 Da    PI: 9.4516
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro02_G02365genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.51.5e-08551246
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     g+WT    + + +a + + ++   +W+  ar +g g+t++++k ++ +
      Ro02_G02365  5 GSWTSRQNKMFENALAVYDKDtpdRWHNLARAVG-GKTAEEVKRHYEM 51
                     89********************************.***********76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 103 aa     Download sequence    
MASSGSWTSR QNKMFENALA VYDKDTPDRW HNLARAVGGK TAEEVKRHYE MLVEDVNKIE  60
SGQVPLPNYS RSSKAGGGSN KSPYTTNSMV DIEDQRFKSL KLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.17e-37MYB_related family protein