PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro02_G02440
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family Dof
Protein Properties Length: 222aa    MW: 23615.1 Da    PI: 7.1466
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro02_G02440genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof118.13.3e-371068462
       zf-Dof  4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                 + l+cprC+st tkfCyynny+l+qPr+fC++CrryWt+GGalr+vPvGgg+rknk+++
  Ro02_G02440 10 DPLPCPRCNSTVTKFCYYNNYNLAQPRHFCRSCRRYWTQGGALRDVPVGGGTRKNKAKR 68
                 5689***************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MGYPPPPSAD PLPCPRCNST VTKFCYYNNY NLAQPRHFCR SCRRYWTQGG ALRDVPVGGG  60
TRKNKAKRSR NQAAAGSSSS TSPSSSSLTH DTKPILDKSD EHLLNLTDHI AAATSGGFSS  120
LMMMNPQEQP GFLSLGGYGY GSGLAHGFQQ GFGYAAFPPE GASVNGVPAY SSVFNTWQMP  180
GADHEGGLVD DNGSHCFDWP ELDISNSMPA VNGKEANSSL AV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66940.12e-29Dof family protein