PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro02_G08800
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 334aa    MW: 36980.8 Da    PI: 6.8825
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro02_G08800genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.57e-0995139751
                  HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                   +r   NReA r++R++Kka+ + Le++v  L a N++L k+l+ 
  Ro02_G08800  95 KKRPLGNREAVRKYREKKKARAASLEDEVVRLRAVNQQLMKRLQG 139
                  467788**********************************99974 PP
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    
MDDGELDFSN QELDFSIPNI TGELPSSCSI ENMFGEFFKE TDTACTHNHI CNPPSGPDTS  60
HRHTCIHVHT KILSSASEDK AGTDDTAESG EKNSKKRPLG NREAVRKYRE KKKARAASLE  120
DEVVRLRAVN QQLMKRLQGQ AALEAEIARL KCLLVDIRGR IEGEIGSFPY QKPVNPSMHN  180
PNMTSAYVMN PCNMQCDDQL YCLQRGNDGR CGDGAAMNGQ GFSGCEFENL QCFANQDGGS  240
LGLSGCDLGN VMSESNVNLS STKKRKVCLP VTDASGHRKC QWEPLSNIGV KNSYSRKKDL  300
CRFIAFRWSI LCPLISEPFI NVGVVLLDKF FIVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35040.18e-88bZIP family protein