PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro02_G12809
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 337aa    MW: 37122 Da    PI: 7.2697
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro02_G12809genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.56.7e-09181229553
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                  kr++r   NR +A rs +RK  +  eLe+kv++L++e ++L  ++  l+
  Ro02_G12809 181 KRAKRILANRQSAARSKERKVRYANELERKVQTLQTEATTLSAQVTLLQ 229
                  9****************************************99887775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MDSNHLSANP SPTSSNDIEQ MPETPHRGGS YHRRAHSDIS FRLPNFDDLL LFDPSDLDLS  60
SFPSPSPVPP RGNPNSAVPM PIDSDDSSGT NPSRPRPTSS GPTATAAHFR SLSVDSDFFD  120
GLGFGGAGEP GKEVVGGKRA GGHHRHSNSM DGSFDADSVL DGLKKSITPD RLAELSLIDP  180
KRAKRILANR QSAARSKERK VRYANELERK VQTLQTEATT LSAQVTLLQR DTTVITAENK  240
ELKIRLQAME QQAQLRDALN EKLKEEVERL KIETSQHGNG NPFYRGLPPQ YASPQSTLHN  300
QFGGSQSQQH QQQLHMLHNQ NVNGQPHPSF MDFNQRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.16e-61bZIP family protein