PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ro02_G21448

Organism

Rubus occidentalis

Taxonomic ID

75079

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus

Family

bZIP

Protein Properties

Length: 447aa MW: 48642.7 Da PI: 10.4868

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ro02_G21448	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.2	8.8e-14	363	406	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L+ + Ro02_G21448 363 RRQRRMIKNRESAARSRARKQAYTLELEAEVAKLKEMNEELQRK 406 79************************************999754 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MGKFRDLSLR DKMGSNINFK NFGDVQNGEG IGGRLAGSFS LARQTSVYSL TFDEFQNTMG 60 GLGKDFGSMN MDELLKNIWT AEEIQGITST SGAGEGNALG GNLQRQGSLT LPRTLSQKTV 120 DDVWKELIRE NSDVKFGILG GMSNLPQEQR QQTLGEMTLE DFLARAGVVR EEAEEMARPN 180 NGGFFGELLR SNNHTGLTPG FQQPSRNNGH LGNRAESNNN SVHHQSPSLA LNVGGVRTSQ 240 QQTHQLPPQQ QAIYPKPATL AFSPSMHLVS NAQLTSPRTR GPMAAVVEPS RNTTFSQGGG 300 FPGAGVGMGG VGARGVTVAS PVNQMSPDVT ARSSADASSL SPVPYMFTRG RKANGALEKV 360 VERRQRRMIK NRESAARSRA RKQAYTLELE AEVAKLKEMN EELQRKQAKI VEVQKDQILE 420 TMKLNWGGKK QCLRRTLTGP WGSTGNH

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MGKFRDLSLR DKMGSNINFK NFGDVQNGEG IGGRLAGSFS LARQTSVYSL TFDEFQNTMG  60
GLGKDFGSMN MDELLKNIWT AEEIQGITST SGAGEGNALG GNLQRQGSLT LPRTLSQKTV  120
DDVWKELIRE NSDVKFGILG GMSNLPQEQR QQTLGEMTLE DFLARAGVVR EEAEEMARPN  180
NGGFFGELLR SNNHTGLTPG FQQPSRNNGH LGNRAESNNN SVHHQSPSLA LNVGGVRTSQ  240
QQTHQLPPQQ QAIYPKPATL AFSPSMHLVS NAQLTSPRTR GPMAAVVEPS RNTTFSQGGG  300
FPGAGVGMGG VGARGVTVAS PVNQMSPDVT ARSSADASSL SPVPYMFTRG RKANGALEKV  360
VERRQRRMIK NRESAARSRA RKQAYTLELE AEVAKLKEMN EELQRKQAKI VEVQKDQILE  420
TMKLNWGGKK QCLRRTLTGP WGSTGNH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34000.1	2e-89	bZIP family protein