PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ro03_G05245

Organism

Rubus occidentalis

Taxonomic ID

75079

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus

Family

Dof

Protein Properties

Length: 171aa MW: 19447.2 Da PI: 9.1604

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ro03_G05245	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	121.9	2.1e-38	52	110	2	60
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +ek+++cprC+s++tkfCy+nny+++qPr+fCk+C+ryWt+GGalrnvPvG+grrk k Ro03_G05245 52 PEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKTKP 110 68999***************************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 171 aa Download sequence
MAEVSNGQDV PGIKLFGTTI TLQNRQVLRD DHHRQPKKAD DVHDQTLEMK RPEKIIPCPR 60 CKSMETKFCY FNNYNVNQPR HFCKGCQRYW TAGGALRNVP VGAGRRKTKP PCRELAGFTD 120 GCLYEASEVL HQFELDGMVE EWHVAAVQGN FRHVFPVVKR RRSGSGGQTC S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29160.1	4e-59	Dof family protein