PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro03_G06962
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 195aa    MW: 21608.2 Da    PI: 10.7003
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro03_G06962genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.33.9e-09168193328
                  XXCHHHCHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaei 28 
                  e+ r +r++kNRe+A rsR+RKk++i
  Ro03_G06962 168 EDPRHKRMIKNRESAARSRARKKESI 193
                  6889*******************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    
MLTSRIFNLF YLRRIFHKQK LQNSPKSQHL LSISFNAVTN TGTGIGAGNS SEEESSSITN  60
TTFSQTTPPR TTMEDAWKHI NHASLSSSAR VPFGNGPPNN SMVISSSTTA DPTSLNSPPP  120
MMQNQHYYQL FCVNTPIIIN PNQGLANASS SFGTENKKRL PESDLISEDP RHKRMIKNRE  180
SAARSRARKK ESISL