PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro03_G10052
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 231aa    MW: 26074.9 Da    PI: 8.1681
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro03_G10052genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.21.3e-1190135550
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                  kr +r   NR +A+rsR RK+++i eLe+ v +L++e +aL  ++ 
  Ro03_G10052  90 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQSEVSALSPRVA 135
                  899**********************************999987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MSMFSDDIAV PPTVTSSSNP STPSDQNSNN DENVNHNGIN HRPLMHLTID CHQQQQPKSE  60
PGEVESSCDP RDPHSQSHAP PPPTSPADPK RVKRILANRQ SAQRSRVRKL QYISELERSV  120
TSLQSEVSAL SPRVAFLDHQ RLILNVDNSA LKQRIAALAQ DKLFKDAHQE ALKKEIERLR  180
QVYHHQTLKK MGNNSNQNQN AAPQQQQQAH NHNPADIMLC TDHKEQQQIL N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.15e-61bZIP family protein