PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro03_G25494
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family C2H2
Protein Properties Length: 79aa    MW: 9136.66 Da    PI: 10.0772
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro03_G25494genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H220.21.6e-062243122
                 EEETTTTEEESSHHHHHHHHHH CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirt 22
                 ++C +C ksF r   Lk H+++
  Ro03_G25494 22 FVCDNCEKSFERANGLKDHQSK 43
                 89*****************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    
MKGIDPRKQQ TIARAAEAAV RFVCDNCEKS FERANGLKDH QSKRKLWILF VQLIHVLGDA  60
PHHGFVPHNR LFVGCYMKY