PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro03_G26345
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family FAR1
Protein Properties Length: 137aa    MW: 15594.4 Da    PI: 4.8114
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro03_G26345genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR126.32.5e-0862107147
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 
                  k+Y++Y+k +GF+v++++s +  ++ge +  tf+Cs+ gk+++++++
  Ro03_G26345  62 KYYKSYGKGAGFEVCRRTSCRG-DDGELKYITFTCSRFGKPSSKSRH 107
                  69***************99998.9999**************999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
METENVQNEE NMENSGNELE TAINVDENLE TFENEAKNAN EKEKVKEPKI ELVFESVDEL  60
EKYYKSYGKG AGFEVCRRTS CRGDDGELKY ITFTCSRFGK PSSKSRHAFK FQPVSMITKS  120
VVDVFGKQES IVLKASK