PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ro03_G27788

Organism

Rubus occidentalis

Taxonomic ID

75079

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus

Family

EIL

Protein Properties

Length: 408aa MW: 46668.7 Da PI: 5.3748

Description

EIL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ro03_G27788	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	EIN3	171.5	8.8e-53	48	158	1	113
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkek 98 +el++rm +d+m lkrl+e++ + ke+ + ++k+++s+eqarrkkmsraQDgiLkYMlk+mevc++qGfvYg ipekgkpv+ asd+Lr+WWk+k Ro03_G27788 48 DELERRMLRDKMCLKRLREQTTKG--GKEV-IVTAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKTQGFVYGVIPEKGKPVTRASDNLREWWKDK 142 79*****************995..5999.777789********************************************************* PP XXXXXXXXXXXXXX.X CS EIN3 99 vefdrngpaaisky.q 113 v+fd+ngpaai+++ + Ro03_G27788 143 VRFDQNGPAAIANEyD 158 **********9744 PP
2	EIN3	29.7	1.2e-09	155	257	280	353
XXXXXXXXXXXX.XXXXXXXXXX...............................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXX CS EIN3 280 qkedvegkkeskikhvqavktta...............................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadk 346 +++dveg +++ +vq++k + +f++ rkrk ++s+ ++v ++++ + c+ q+++se +++f+dk Ro03_G27788 155 NEYDVEGAEDEPKFDVQECKPDNlhssnfgmkimrerlhvhqpplfpvkgevitNFDFMRKRK-PSSDLNMVGDQKI-YPCEFVQCPYSEFRHGFHDK 250 6899666666599**99***********************************9.8999999999976.**************** PP XXXXXXX CS EIN3 347 nsisqne 353 +s+++++ Ro03_G27788 251 TSRDNHQ 257 ***98 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MMMMFDEMGF CADLDFISTT PGGEVAIPQA ETEAIVEDDY TDKEIDVDEL ERRMLRDKMC 60 LKRLREQTTK GGKEVIVTAK QRQSQEQARR KKMSRAQDGI LKYMLKMMEV CKTQGFVYGV 120 IPEKGKPVTR ASDNLREWWK DKVRFDQNGP AAIANEYDVE GAEDEPKFDV QECKPDNLHS 180 SNFGMKIMRE RLHVHQPPLF PVKGEVITNF DFMRKRKPSS DLNMVGDQKI YPCEFVQCPY 240 SEFRHGFHDK TSRDNHQLSC PFNKQPAAPS AKSVPPSFDL SGGVLEDGQK IIGELMSFYD 300 SNVQGDKNAN PNSLATNESN VSSNHHVFPR EEGQFDQFKV VSSPFETNHN INFPMMFGSP 360 FDLASSDYKE DLQGLALPME KQSETSIWFQ INCKQQSFDR RVVQCTLT

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MMMMFDEMGF CADLDFISTT PGGEVAIPQA ETEAIVEDDY TDKEIDVDEL ERRMLRDKMC  60
LKRLREQTTK GGKEVIVTAK QRQSQEQARR KKMSRAQDGI LKYMLKMMEV CKTQGFVYGV  120
IPEKGKPVTR ASDNLREWWK DKVRFDQNGP AAIANEYDVE GAEDEPKFDV QECKPDNLHS  180
SNFGMKIMRE RLHVHQPPLF PVKGEVITNF DFMRKRKPSS DLNMVGDQKI YPCEFVQCPY  240
SEFRHGFHDK TSRDNHQLSC PFNKQPAAPS AKSVPPSFDL SGGVLEDGQK IIGELMSFYD  300
SNVQGDKNAN PNSLATNESN VSSNHHVFPR EEGQFDQFKV VSSPFETNHN INFPMMFGSP  360
FDLASSDYKE DLQGLALPME KQSETSIWFQ INCKQQSFDR RVVQCTLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20770.1	1e-73	EIL family protein