PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ro04_G02574

Organism

Rubus occidentalis

Taxonomic ID

75079

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus

Family

bZIP

Protein Properties

Length: 223aa MW: 25683.9 Da PI: 7.1276

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ro04_G02574	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	44.2	4.1e-14	122	172	5	55
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +++rr+++NRe+ArrsR RK++ ++eL v L +eN+ L ++l+++++ Ro04_G02574 122 RKQRRMISNRESARRSRMRKQKHLDELWSQVLRLRTENHNLLDRLNHMSES 172 79***************************************9766666554 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MPSKQPLHQY NISFKYYLAG LKKFRAMLSG EISGIHYLST PEIIQIPNPA DFGNIIMQDT 60 IPSSFHFNGA SVFSTLFHSQ IPPPCHDRFS TPVQSSSLSN NSSTSDEAEE HVQQLSNIID 120 QRKQRRMISN RESARRSRMR KQKHLDELWS QVLRLRTENH NLLDRLNHMS ESHDRVLEEN 180 AKLKEEASDL RQMLTEIQIS TLRSTELEVE VPCSTTLSTD LLH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	135	142	RRSRMRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30530.1	3e-43	bZIP family protein