PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro04_G07211
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family GRAS
Protein Properties Length: 508aa    MW: 56552.4 Da    PI: 5.4746
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro04_G07211genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS367.61.7e-1121405061374
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  lv++L++cAeav+ +d++ a+alL +l+++a   g+++qR+a++f +AL+ rla  v+ l  a+ +++++   sse+  al l +e++P ++f+h++a
  Ro04_G07211 140 LVQQLISCAEAVACRDKTHASALLYELRTNAQVFGTSFQRVASCFIQALSDRLAL-VQPLG-AVGVTTKTIAVSSEKDEALDLVYEICPHIQFGHFIA 235
                  689***************************************************8.44444.3444444445688888999***************** PP

         GRAS  99 NqaIleavegeervHiiDfdis....qGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
                  N  Ilea+eg + vH+iD++++    +G QW +L+++LasR+ ++ ++lRiTgvg+    s e+le++g+ L+ +A++++++f+f + v+++le+l+ 
  Ro04_G07211 236 NASILEAFEGGSSVHVIDLGMTlgllHGYQWRNLMDSLASRTgQPLHRLRITGVGN----SGERLEAIGNELKLYAQSMELEFDFLA-VESNLENLKA 328
                  ******************98753333789*************455569********....***************************.79******** PP

         GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErel 289
                  e++++  gE+l++n++lqlh l++es    +   +vL+++ +lsPk++v+veq+++hn++ Fl rf+eal+ ysa+fdsl+a lpr +  r+k+E+++
  Ro04_G07211 329 EDFNLIDGEVLIINSILQLHCLVKESRGALN---SVLHTLYELSPKLMVLVEQDSSHNGPFFLGRFMEALHNYSAIFDSLDAMLPRYDTRRAKMEQFY 423
                  ***********************88877777...8*************************************************************** PP

         GRAS 290 lgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  +g+ei+n+v+ceg +r+erhe++ +Wr+r+++aGF+p+pl+    +qa   l+  + +gy++ e++g++vlgWk++p+v+vS+Wr
  Ro04_G07211 424 FGEEIKNIVSCEGPARVERHERVDQWRRRMRRAGFQPAPLKMI--AQATKWLEINACEGYTIVEDKGCFVLGWKSKPIVAVSCWR 506
                  ****************************************865..5777888888888**************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 508 aa     Download sequence    
MASGFYGQPH EIYGDNTSAE VVGLDLNLSS MSCLPFPSLS TLENNSAIWE IPFIDGTRTY  60
KRVKLELSAD ESIISTNYSL YNGSGSMHTS GFNSLPRIQF RDHISAYTRR YLAAEAMEEA  120
ASTLLGGRPE EEGSGDGMKL VQQLISCAEA VACRDKTHAS ALLYELRTNA QVFGTSFQRV  180
ASCFIQALSD RLALVQPLGA VGVTTKTIAV SSEKDEALDL VYEICPHIQF GHFIANASIL  240
EAFEGGSSVH VIDLGMTLGL LHGYQWRNLM DSLASRTGQP LHRLRITGVG NSGERLEAIG  300
NELKLYAQSM ELEFDFLAVE SNLENLKAED FNLIDGEVLI INSILQLHCL VKESRGALNS  360
VLHTLYELSP KLMVLVEQDS SHNGPFFLGR FMEALHNYSA IFDSLDAMLP RYDTRRAKME  420
QFYFGEEIKN IVSCEGPARV ERHERVDQWR RRMRRAGFQP APLKMIAQAT KWLEINACEG  480
YTIVEDKGCF VLGWKSKPIV AVSCWRCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.15e-76GRAS family protein