PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro04_G08918
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 163aa    MW: 19098.7 Da    PI: 10.8445
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro04_G08918genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.74.6e-1255114160
                  XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                  +ke +r +r+ +NR++A+  R+RKk ++  Le ++keLe  N  L +++++l +e   l+
  Ro04_G08918  55 DKEYRRLKRLLRNRVSAQQARERKKVYVNDLESRAKELEDANFNLEEKISTLINENTMLR 114
                  58999***********************************************99988665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MSSSLDNQQQ TGSSSSSWRK FNANNSSSSP HSLHAHQNNK KHKLGKRRRG RNPVDKEYRR  60
LKRLLRNRVS AQQARERKKV YVNDLESRAK ELEDANFNLE EKISTLINEN TMLRKVMMDK  120
LSRTFNQYYC KICVMVLMNT RPKVDESIEQ KQDRSTMATT VYG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14151KHKLGKRRRGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17609.13e-33bZIP family protein