PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro04_G25946
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 342aa    MW: 37185.6 Da    PI: 5.9247
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro04_G25946genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.73.4e-10242290553
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                  kr++r   NR +A rs +RK  +i+eLe+kv++L++e ++L  +l  l+
  Ro04_G25946 242 KRAKRIWANRQSAARSKERKMRYIAELEQKVQTLQTEATSLSAQLTLLQ 290
                  9*****************************************9998886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MAYMSCWLAA VMDKDKSPAH GGGLPPPSGR YSSLLPTGTT YNVKSEPSSS SSFPPLVSGT  60
TAESGHFGHG MSTESNHFSH DISRMPDYPP RKLGHRRAHS EIVTLPDDIS FDSDLGVVGG  120
ADGPSFSDET EEDLFSMYLD MDKFNSSSAT SSFQVGEPSA SAAPPAPALE PASGALTCST  180
ENIAMGTHER PRVRHQHSQS MDGSTTIKPE MLMSSSEEMS AADSKKAMSA TKLAELALID  240
PKRAKRIWAN RQSAARSKER KMRYIAELEQ KVQTLQTEAT SLSAQLTLLQ RDTNGLTAEN  300
SELKLRLQTM EQQVHLQDGE ALSIFMLCHG GFRDRDYNII PI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31370.51e-112bZIP family protein