PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro05_G03245
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family ZF-HD
Protein Properties Length: 67aa    MW: 7332.18 Da    PI: 9.899
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro05_G03245genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer60.44e-192861337
  ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegt 37
                 +vrY eC+kNhAa++Gg+avDGC+Efm+s geegt
  Ro05_G03245 28 TVRYGECQKNHAANIGGYAVDGCREFMAS-GEEGT 61
                 79**************************9.66654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 67 aa     Download sequence    
MKKQQVVVRR DGSSRRSSSS TSSSVVRTVR YGECQKNHAA NIGGYAVDGC REFMASGEEG  60
TNLLFMN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74660.11e-15ZF-HD family protein