PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro05_G03390
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 137aa    MW: 15877 Da    PI: 8.7594
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro05_G03390genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.83.6e-1657106554
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                  kr++r+++NRe+ArrsR RKk++ieeLe +v++L   N++L +++ +l +
  Ro05_G03390  57 KRTKRMISNRESARRSRMRKKKRIEELEHEVDQLYITNSQLCEKVIQLLE 106
                  9****************************************999877755 PP
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    
MNPKPSSESS SLPFCPTWIF PMSRIHDFTP KPNTSTLGTD TVFDENAAQE QSRSHEKRTK  60
RMISNRESAR RSRMRKKKRI EELEHEVDQL YITNSQLCEK VIQLLEGNQQ ILKENAQLKE  120
RVSSLQVTVA DLIDVTF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60830.15e-15bZIP family protein