PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro05_G19144
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 167aa    MW: 19288.7 Da    PI: 7.8944
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro05_G19144genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.36.7e-131874359
                 XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59
                 ++k+ +++q+NRe+ArrsR +K++ +eeL+ ++  L+  N + ++ +++  k + ++
  Ro05_G19144 18 DDKKRKKMQSNRESARRSRMKKQKHVEELTVEITRLQMSNNQIRQSIDSKDKAYNEV 74
                 68********************************************99988877765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
MSSVQRQASS GSDGSAVDDK KRKKMQSNRE SARRSRMKKQ KHVEELTVEI TRLQMSNNQI  60
RQSIDSKDKA YNEVEAWNNV MRAQEKELTD RLRYLESIEQ TIVEFSGVFD EDLGNMAEMH  120
HDSLLNPWQL PYSTQPITAS SADMTRKTHA QHMPDIPRNL VRLILDA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12024KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.19e-32bZIP family protein