PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro05_G24744
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 297aa    MW: 33663.7 Da    PI: 7.1275
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro05_G24744genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.28.7e-14254296547
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                  +r++r++kNRe+A rsR+RK+a++ +Le++v  L + N+ Lkk
  Ro05_G24744 254 RRQKRMIKNRESAARSRARKQAYTNQLENEVFHLRKMNTWLKK 296
                  69************************************99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MDDRTLVSGN EDEEPQFPHL ARQGSNYNLT LDHNEVRSNL GNISRPLNTS MAHLDEFLKN  60
VISVDQEGKL LQNPSSSSSL PTSIFLGNFN LNGPLMSSKK KTMDEVWKEI VLHDHHPHEQ  120
LHHQTMTTIG EPTTATTTPE HLLVRAGILN AHPMRPIDPT AVVSQQADWF QFQVTAAAQQ  180
QMTMLDSNFK VCESVFENSS SAVHLDNYSE SHQVGGLSMP MPAISAASSS ESQAAHAERK  240
RHYSDEMKEK NIERRQKRMI KNRESAARSR ARKQAYTNQL ENEVFHLRKM NTWLKKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.34e-22bZIP family protein