PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro05_G30716
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 286aa    MW: 31902.6 Da    PI: 6.9008
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro05_G30716genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_157.82.4e-18120182163
                  XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  ek+lkre+rkq NRe+ArrsR RK+ae eeL + +++L++e ++Lk+el++lk  ++kl+ e+
  Ro05_G30716 120 EKQLKREKRKQANRESARRSRMRKQAEYEELVKSCDSLSTEQMDLKSELDQLKADAKKLRLEN 182
                  89*********************************************************9887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MDQDVTKKLK GLENSGRLAL EATKSSEQNR DGLTDEADGN IQADHHTQGK NGSESMQSAD  60
NDVKVHTQVR PNAEGEMNGN YTTPTHLVPV SLGSPYEKIG ISTTFSAGER LPFDAMVLDE  120
KQLKREKRKQ ANRESARRSR MRKQAEYEEL VKSCDSLSTE QMDLKSELDQ LKADAKKLRL  180
ENAALREQLK NAQVMQEGGI ASTKTEVGFA LPNGAKDILS NLGSVSSNDQ LDRETHETSI  240
SETITRLHQM LESSSRTDAY FRIGRKWFLL NEHSKGLLSL KNLVKL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1137144RRSRMRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01120.18e-23bZIP family protein