PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro05_G31718
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 145aa    MW: 16711.5 Da    PI: 9.367
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro05_G31718genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.32.1e-1086133556
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                  +++rr+++NReAAr+sR RKka++++Le+   +L +      +el++ +k++
  Ro05_G31718  86 QAQRRLEQNREAARKSRMRKKAYVQQLETSRLKLAQLE----QELDRTRKQC 133
                  689*************************9666665544....4666666666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
STMNYPSTQF ATSRQMGIYE PFRQVGVWRE TFSGGNSSNV GASTIVEVDS RQENKIGFAS  60
HESMVPAGND YESNRSADKC EYLYAQAQRR LEQNREAARK SRMRKKAYVQ QLETSRLKLA  120
QLEQELDRTR KQCYPSHGSC RDHYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77920.12e-31bZIP family protein