PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro06_G04859
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 221aa    MW: 25341.8 Da    PI: 6.6507
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro06_G04859genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.22.3e-15100150555
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                  +++rr+++NRe+ArrsR RK++ ++eL   v  L +eN++L ++l++ ++ 
  Ro06_G04859 100 RKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLVDKLNHVSES 150
                  689***************************************999998775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MQPGEATGLH YLVPSSSSSS PYPPHFSMMS TTTQSNTASA FHFNRFATTP VYNHYQFPSH  60
LLPQEVNNNN NNHPQQPSSF SSNSTSDEAD EQQLSLINER KQRRMISNRE SARRSRMRKQ  120
KHLDELWSQV VWLRNENHQL VDKLNHVSES HDRVVQENAQ LKEEASELRQ MLSDLQLHSP  180
NSNYHPSLRD QLEVDVPCNT AYLRAESSNQ PITTSSMDLL G
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1113120RRSRMRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.13e-48bZIP family protein