PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro06_G07562
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 208aa    MW: 23793 Da    PI: 9.5107
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro06_G07562genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.22.3e-15115173563
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  kr +r+++NRe+ArrsR RKk++ieeL+  v++L   N++L ++l +l +  ++  +e+
  Ro06_G07562 115 KRIKRMISNRESARRSRMRKKKQIEELQYQVDQLHITNRQLSEKLIQLLEGNQQILQEN 173
                  99**********************************************99999999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MFFMDPNESK RNHYLANDAI IPSQLLPRNI SHTSTKQSHL FSSPQNMQAV EVVGNHALLS  60
LQNPIQNPDS VPFFPNRIFP MSHIHDFSPN ASSLSNDTTV FDEAAAGEQS LSYEKRIKRM  120
ISNRESARRS RMRKKKQIEE LQYQVDQLHI TNRQLSEKLI QLLEGNQQIL QENAQLKERV  180
SSLQVILSDL ISPLQRNAEM PPPTPKPT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60830.12e-33bZIP family protein