PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro06_G09776
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family C2H2
Protein Properties Length: 81aa    MW: 9388.42 Da    PI: 8.1491
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro06_G09776genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.41.3e-051538223
                 EETTTTEEESSHHHHHHHHHH..T CS
      zf-C2H2  2 kCpdCgksFsrksnLkrHirt..H 23
                 kC  C + F+r ++L+ H+rt  H
  Ro06_G09776 15 KCAACFRQFNRIEHLVEHMRTsyH 38
                 6999****************9777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    
MDYSRLESSE TLRNKCAACF RQFNRIEHLV EHMRTSYHSA HEPSCGICKK HCRSFESLRE  60
HGHCQNKNAR TYSAAEDANT A