PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ro06_G14388

Organism

Rubus occidentalis

Taxonomic ID

75079

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus

Family

G2-like

Protein Properties

Length: 253aa MW: 28509.3 Da PI: 9.4009

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ro06_G14388	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.2	1.6e-32	14	68	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt+eLH++Fv+av++LGG+++AtPk il++m+v gLt++h+kSHLQkYR+ Ro06_G14388 14 KERLRWTQELHDKFVDAVTKLGGPDRATPKGILKAMGVSGLTIYHIKSHLQKYRI 68 68****************************************************7 PP
2	Myb_DNA-binding	62.3	9.7e-20	16	67	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++++vdav++lGg+ t+k I + mg g+t +++ks++qky+ Ro06_G14388 16 RLRWTQELHDKFVDAVTKLGGPdraTPKGILKAMGvSGLTIYHIKSHLQKYR 67 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MGSSKCSDVS AGNKERLRWT QELHDKFVDA VTKLGGPDRA TPKGILKAMG VSGLTIYHIK 60 SHLQKYRISK FVPETNSSNL QRKNISEILP NFGTTSAAQL NEALHHMHIQ VQRRLSDQLE 120 VHKSLKQKFE AQGRFLDKIS ADRSHNVNRP ILRKPIKPVS RKSLPSLCED SELNAKELGS 180 DSDAEKTEIQ SSGEEFQALK KQRLPNQNDD MPWNFHILED QTANISSYPA VYDQISFPWN 240 FGACTSPLVP SFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	7e-48	G2-like family protein