PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro06_G19249
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 326aa    MW: 36564.3 Da    PI: 5.9718
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro06_G19249genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.68.7e-11193236548
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                  kr +r   NR +A+rsR RK+++i eLe+ v +L+ae + L  +
  Ro06_G19249 193 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR 236
                  899*********************************98877655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MAQLPPKVPN MTPNWPDFSH QKISCFAPNG NGNGNAASQN PCWVDEFLDF SSARRGSHRR  60
SVSDSITFLE APMQDECRGS GAPPESNDHH VEFDRFDDEQ FMSMFTTDEI SAAAAAAAAG  120
PTGSCSNPST PSDHNSINDD DQPPPHGDQK KKRELKHEFE EAESECKLEA QPTQNGDNNA  180
TKNTSSDRKV DPKRVKRILA NRQSAQRSRV RKLQYISELE RSVTSLQAEV SVLSPRVAFL  240
DHQRLLLNVD NSALKQRIAA LAQDKIFKDA HQEALKREIE RLRQVYHQQN IKKMENNNIE  300
QSPNSDTITT QHPDVAADQK EQLLNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-123bZIP family protein