PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ro06_G21952

Organism

Rubus occidentalis

Taxonomic ID

75079

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus

Family

bZIP

Protein Properties

Length: 441aa MW: 49054.6 Da PI: 8.3466

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ro06_G21952	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.1	2.8e-11	148	187	5	44
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 k rr+++NReAAr+sR+RKka++++Le +L++ ++ Ro06_G21952 148 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQE 187 7789************************876666655554 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MMPVGSNRKR GTSKDSGAYD LGELDQALFL YLDGQQDHHQ ASHHVEDQRH QNSSGMRPPT 60 LNIFPSQPMH VEPSSTKGGS TAGLVSSATS GSKRPSEPSM ELANPRKIDA AAPSGPPEPA 120 KTIKREGNRK GPTTSSSEQE GPKTPDPKTL RRLAQNREAA RKSRLRKKAY VQQLESSRIK 180 LTQLEQELQR ARTQGMFFGG GLVGAEQGVP VGMNNISSDA AVFDMEYARW LEEHHRLMCE 240 LRAAVQEHLP ENELRLFVDN SLAHYDEVMN LKSMVAKTDV FHIVSGMWKT PAERCFMWMG 300 GFRPSEVIKI IVTQIEPLTE QQLMAICSLQ QSTSEGEDAL TQGLEALNQS LSDTIASDSL 360 SIPPNMANYM GQMALAMNKL STLEGFVRQA DNLRLQTIHR LQTLLTTRQS ARCLLAIAEY 420 FHRLRALSSL WMGRPRQDHQ G

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MMPVGSNRKR GTSKDSGAYD LGELDQALFL YLDGQQDHHQ ASHHVEDQRH QNSSGMRPPT  60
LNIFPSQPMH VEPSSTKGGS TAGLVSSATS GSKRPSEPSM ELANPRKIDA AAPSGPPEPA  120
KTIKREGNRK GPTTSSSEQE GPKTPDPKTL RRLAQNREAA RKSRLRKKAY VQQLESSRIK  180
LTQLEQELQR ARTQGMFFGG GLVGAEQGVP VGMNNISSDA AVFDMEYARW LEEHHRLMCE  240
LRAAVQEHLP ENELRLFVDN SLAHYDEVMN LKSMVAKTDV FHIVSGMWKT PAERCFMWMG  300
GFRPSEVIKI IVTQIEPLTE QQLMAICSLQ QSTSEGEDAL TQGLEALNQS LSDTIASDSL  360
SIPPNMANYM GQMALAMNKL STLEGFVRQA DNLRLQTIHR LQTLLTTRQS ARCLLAIAEY  420
FHRLRALSSL WMGRPRQDHQ G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06839.3	0.0	bZIP family protein