PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ro06_G23614

Organism

Rubus occidentalis

Taxonomic ID

75079

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus

Family

Dof

Protein Properties

Length: 238aa MW: 25818.4 Da PI: 6.25

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ro06_G23614	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127	5.7e-40	16	76	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++lkcprCds+ntkfCyynny+lsqPr+fCk+C+ryWtkGG+lrn+P+Ggg+rkn k+s Ro06_G23614 16 EQEQLKCPRCDSSNTKFCYYNNYNLSQPRHFCKNCKRYWTKGGSLRNIPIGGGSRKNTKRS 76 57899****************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence
MQDPTTFQPM KPQFPEQEQL KCPRCDSSNT KFCYYNNYNL SQPRHFCKNC KRYWTKGGSL 60 RNIPIGGGSR KNTKRSSSAS KRSSSATNSS SSTVSSSAGT AAAAAAQNAD PQPDRTRVYG 120 PKIDQENPML DISGSFSSLL TSNEQFGSLM DGLNPHGSGL KLMQMGDFGE NVDSSGHGLN 180 SDPGLEVQSN ENPESYMGLQ NGDSSCWNGS NGWPDLAIYT PECELNMGCD IVLLNSRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	2e-37	Dof family protein