PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ro06_G25237

Organism

Rubus occidentalis

Taxonomic ID

75079

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus

Family

GRF

Protein Properties

Length: 93aa MW: 10519.1 Da PI: 10.5857

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ro06_G25237	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.8	5.3e-25	47	88	3	44
WRC 3 epgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 epgrC++tDGKkWRCsr+v +++k+CErH+hrgr rsrk++e Ro06_G25237 47 EPGRCKKTDGKKWRCSRDVAPDQKYCERHMHRGRPRSRKHVE 88 8***************************************97 PP
2	QLQ	22.3	4e-09	1	19	16	34
QLQ 16 lAyKyLaanqPvPpeLlqa 34 ++yKy++a +PvP +Ll++ Ro06_G25237 1 MIYKYMMAALPVPRDLLFP 19 8***************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 93 aa Download sequence
MIYKYMMAAL PVPRDLLFPT TSSASASTVS LSGGGFNLRL SNSTVLEPGR CKKTDGKKWR 60 CSRDVAPDQK YCERHMHRGR PRSRKHVEIH ADQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53660.1	1e-26	GRF family protein