PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro07_G04383
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family WRKY
Protein Properties Length: 170aa    MW: 18648.9 Da    PI: 8.8239
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro07_G04383genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY32.12.3e-10147167121
                  ---SS-EEEEEEE--TT-SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefp 21 
                  ldDgy+WrKYGqK vk+s +p
  Ro07_G04383 147 LDDGYRWRKYGQKAVKNSLYP 167
                  59****************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MEGGQEHMNP PPTSSSSSPP LSLPLILPPQ NSPYHLFTPS VLNPPLPPLQ PHDHQVLSPL  60
DIDWISLLSG QAGQGLVSHD QINNYRAVPG MVDMSTASGA AAENSIEGDD DREQKSSKKR  120
KGGGNYKMRK ASRPRFAFQT RSADDILDDG YRWRKYGQKA VKNSLYPSLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46130.23e-17WRKY family protein