PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro07_G11496
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family EIL
Protein Properties Length: 498aa    MW: 56254.9 Da    PI: 4.5575
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro07_G11496genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN31988.1e-611012231128
                  XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
         EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkek 98 
                  +el++rmw+d+mll+rlk+++k     ke  ++++++++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd+Lr+WWkek
  Ro07_G11496 101 DELERRMWRDRMLLRRLKDQNKG----KEG-ADSARQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLREWWKEK 193
                  79*******************98....677.777889************************************************************* PP

                  XXXXXXXXXXXXXXXXXXXXXXXXXXX... CS
         EIN3  99 vefdrngpaaiskyqaknlilsgesslqte 128
                  v+fdrngpaaiskyqa+n i++ ++++++e
  Ro07_G11496 194 VRFDRNGPAAISKYQADNSIPGVDDEQNVE 223
                  *********************999988764 PP
Sequence ? help Back to Top
Protein Sequence    Length: 498 aa     Download sequence    
MPETRAHEML NDVFGESTNG LGQRIEEQSE AALRSFSGFY QPNINLGCSL CRCAMGIFEE  60
MGFCGNLDFL SAPAGEGEVA PEQEPEATVE EDYSDEEMDV DELERRMWRD RMLLRRLKDQ  120
NKGKEGADSA RQRQSQEQAR RKKMSRAQDG ILKYMLKMME VCKAQGFVYG IIPEKGKPVS  180
GASDNLREWW KEKVRFDRNG PAAISKYQAD NSIPGVDDEQ NVEVEDCKPI LNHFNMGNIG  240
QRERLVPQIK GELIETNSDF GKKRKQQQAE EPQMMPNQNI YTCEFLQCPY SDYRIGFIDI  300
TARNNHQLTC PYRSNFSPVF GMPNLINSDK PVGFSLPVAQ PKPAILQPVD QTSTYNVSGL  360
GLTDDGQKMI SELMSSYDGS TPQNKNSNTG DMNVVEDHNH QQAKFQFQMD DNFYGQGMVM  420
GRNNMPESTP IPMLQPVFQS PEVQFDQCKV FDSAFGNNPN DAIPDIRFGP GSQFSLAPPD  480
YNVGNSLLKQ DASSFWYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20770.17e-60EIL family protein