PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro07_G13012
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 224aa    MW: 25085.9 Da    PI: 7.3553
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro07_G13012genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.92.4e-0983126750
                  HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                   rr   NReA r++R++Kka +  Lee+vk+L+  N++L  +l+
  Ro07_G13012  83 RRRPSGNREAVRKYREKKKAHTSYLEEEVKKLQLLNQQLVRKLQ 126
                  566667*********************************98887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MDDGEVETSD HALFPKPNSS SNFHVDTFVK NNTRTCLHTH TCNLPGPAAA HTHTCYHTHT  60
QVLPSEDDDH AKNKEHSVAK PKRRRPSGNR EAVRKYREKK KAHTSYLEEE VKKLQLLNQQ  120
LVRKLQGQAS LEAEFLRLRS LLLDFRGKID SEFQKHYCEL QSTGGETGLS CQTDLPCFCL  180
PAVGSSLQAR IDGATGKRMV SFGGNCQDAS YDDNDGTYEV LSSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35040.15e-18bZIP family protein