PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro07_G13594
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family bZIP
Protein Properties Length: 360aa    MW: 39865 Da    PI: 8.4333
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro07_G13594genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.71.6e-15250298553
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 
                  +r++r++kNRe+A rsR+RK+a++ eLe+kv  Le+eN++L+k+  +lk
  Ro07_G13594 250 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLRKQKAMLK 298
                  79****************************************9988777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    
MGIQTMGSQG GADGNCKQSQ FQPLARQNSI YNLTLDEVQN QLGDLGKPLS SMNLDELLKN  60
VWSAEANQTM GMDIEGTTLV NQASLQRQAS LSLTSALSKK TVDEVWRDIQ QSKDSEEKKS  120
RERQPTLGEM TLEDFLVKAG VVAEASDKKN AGGPLVGVDA NVASQFPQGQ WLQYAQPQYQ  180
HPQQSMMGVY MPSQPIPPTM HVGGGAVMDV PYPDNQIALP SPLMGTLSDT QTPGRKRGNP  240
EDIVEKTVER RQKRMIKNRE SAARSRARKQ AYTNELENKV SRLEEENERL RKQKAMLKSY  300
GLVNSASGSL NCGKPCAHFH LAHTQTARDL PMFEEIEKVL PSAPPPEPKY QLRRTTSAPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.11e-87bZIP family protein