PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro07_G18769
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family G2-like
Protein Properties Length: 201aa    MW: 23045.7 Da    PI: 10.2683
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro07_G18769genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like28.92.5e-09958450
      G2-like  4 lrWtpeLHerFveaveqLGGsek.AtPktil.elmk.vkgLtlehvkSHL 50
                 ++Wt e H++Fv+ v  LGG  k  tP+ ++ e+m+ v+gL+   +  H+
  Ro07_G18769  9 IEWTMEHHKKFVDIVVGLGGFSKiGTPRIVVaEMMNtVEGLSQRTLVHHM 58
                 78******************87747***87526776589***99998887 PP
2G2-like39.11.6e-12108157551
      G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkvk...gLtlehvkSHLQ 51 
                   Wt e H r veav++LGG  kAtP ++l+lm+ +   gL +  ++ HL 
  Ro07_G18769 108 SWTVEHHMRVVEAVTKLGGLSKATPTAVLRLMEEErrlGLNVRTLRRHLS 157
                  6*******************************987556788888888886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MDGDRQDSIE WTMEHHKKFV DIVVGLGGFS KIGTPRIVVA EMMNTVEGLS QRTLVHHMVL  60
FQLLNKRTQL SLGRRTTQPK QPCSDSYRSL VSNFEGLHVA PPKRLLPSWT VEHHMRVVEA  120
VTKLGGLSKA TPTAVLRLME EERRLGLNVR TLRRHLSWLR YLQKKTQKTI LESKKNDRES  180
AGCCLKEREV TDYTLETEAS L