PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ro07_G18770
Organism
Rubus occidentalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus
Family G2-like
Protein Properties Length: 215aa    MW: 24738.9 Da    PI: 11.3023
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ro07_G18770genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like248.4e-08100157554
      G2-like   5 rWtpeLHerFveaveqLGGsekAtPk.....tilelmkv...kgLtlehvkSHLQkYR 54 
                   Wt e H+r v+av++LG  ++A P      ++l++m+    +gLt+  +  HL + R
  Ro07_G18770 100 TWTLEHHKRIVDAVTKLGDLDVAKPMeklavAVLRVMEEerrQGLTVWILTKHLRRLR 157
                  6************************633333588999752236999999999998877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MPWAMTNNLS QIQQEALSGH AAPAWRFQES RSMRVRFKGL TRGPMLYHVG QFQQLQKETR  60
SLLCGRKATP HRKSCCKLSV LVDDLMRDLK GLNMEPKLST WTLEHHKRIV DAVTKLGDLD  120
VAKPMEKLAV AVLRVMEEER RQGLTVWILT KHLRRLRDLQ RGTQEAIVEA AVKKAQHGRV  180
RSPKQVKLGR RRKNDDQFLP RTMEKGAQPH NPMAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13640.15e-07G2-like family protein