PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Ro07_G20653

Organism

Rubus occidentalis

Taxonomic ID

75079

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rubus

Family

Dof

Protein Properties

Length: 364aa MW: 39052.9 Da PI: 8.9161

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Ro07_G20653	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.1	8.3e-38	77	137	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalr vPvGgg+r+nk+s+ Ro07_G20653 77 PETALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSK 137 67899*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MVFSSMPGYL DPPNWQQQQS NHHHHQQQGD GRDQNPQLLP PPQLPSGGTG DGSGGGAGTI 60 RPGSMSDRAR QAKMPQPETA LKCPRCESTN TKFCYFNNYS LTQPRHFCKT CRRYWTRGGA 120 LRSVPVGGGC RRNKRSKRSK SPASAAAADH HQRQAAGSSS STVSNSNSCS TSENLLGHLA 180 PPPHQFPFLP SLHHLSDYNS GGLNFGGIQP SGVEFHSQNI GASGSGGVVG SILSTGLAEH 240 WRSSLQHHQV QQGQQFPFLA NLEPPTSNGL YQFDGNQNNA QEPPCYGRGA GQLLSKPLTD 300 SSTGVTQVAN VKMEESQALN LSRNFLGSLG NDHHQQYWGS SATGGINNAW TDLSGFTSST 360 SHLL

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MVFSSMPGYL DPPNWQQQQS NHHHHQQQGD GRDQNPQLLP PPQLPSGGTG DGSGGGAGTI  60
RPGSMSDRAR QAKMPQPETA LKCPRCESTN TKFCYFNNYS LTQPRHFCKT CRRYWTRGGA  120
LRSVPVGGGC RRNKRSKRSK SPASAAAADH HQRQAAGSSS STVSNSNSCS TSENLLGHLA  180
PPPHQFPFLP SLHHLSDYNS GGLNFGGIQP SGVEFHSQNI GASGSGGVVG SILSTGLAEH  240
WRSSLQHHQV QQGQQFPFLA NLEPPTSNGL YQFDGNQNNA QEPPCYGRGA GQLLSKPLTD  300
SSTGVTQVAN VKMEESQALN LSRNFLGSLG NDHHQQYWGS SATGGINNAW TDLSGFTSST  360
SHLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.2	1e-47	Dof family protein