PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY11034.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MYB

Protein Properties

Length: 242aa MW: 27294.6 Da PI: 6.6341

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY11034.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.6	7.9e-10	22	66	3	45
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45 +W+ +Ed+ + +a +++ g +W++Ia++++ g++++++ ++ TEY11034.1 22 AWSRQEDKVFEQALVEFPEGfgdRWRAIAEHLP-GKSPEEVEAHYE 66 6******************************.********96 PP
2	Myb_DNA-binding	23.9	9.8e-08	159	191	15	47
HHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 15 avkqlGggtWktIartmgkgRtlkqcksrwqky 47 + ++G+g+W++I+r + +Rt+ q+ s+ qky TEY11034.1 159 GLDRYGKGDWRSISRNVVVTRTPTQVASHAQKY 191 5679****************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MNLHQNIIMY GGIDGMSCGA AAWSRQEDKV FEQALVEFPE GFGDRWRAIA EHLPGKSPEE 60 VEAHYEALLY DIAEIDSGRV ELPSYSDESI GWESDRSRSG TPGQISFGAP GNRSRQLDVE 120 RKKGTPWTED EHRILFVPCY AVLEFGRLNV GWFWLFLIGL DRYGKGDWRS ISRNVVVTRT 180 PTQVASHAQK YFLRHTSGKK ERKRSSIHDI TTAMDSLTVP PPAPTSLPSQ GGYQAFNFSM 240 PR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	1e-64	MYB family protein