PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY11070.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 199aa MW: 22344.5 Da PI: 9.1023

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY11070.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	83	1.9e-26	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n + rqvtfskRr g++KKA+EL +LCdae+a+i+fs tg+ly+ys+ TEY11070.1 9 KKIDNLTSRQVTFSKRRRGLFKKAQELATLCDAEIALIVFSATGRLYDYST 59 68***********************************************96 PP
2	K-box	28.6	5.9e-11	97	161	26	90
K-box 26 keienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqee 90 ke+ +L e+++l Ge+L+ L +eL +Le+ +e++l ++ +kK+ l e+ l++ ++++++ TEY11070.1 97 KELTSLTLELKQLNGEELQGLGTNELARLERVVESALGRVVKKKEIQLEEENAMLKQLAENTRNT 161 67889999**********************************************99999988775 PP

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence
MVRQKIQIKK IDNLTSRQVT FSKRRRGLFK KAQELATLCD AEIALIVFSA TGRLYDYSTS 60 SMMQIIQRLK MHTEGSNRFR QILHNQEGGD YNGAASKELT SLTLELKQLN GEELQGLGTN 120 ELARLERVVE SALGRVVKKK EIQLEEENAM LKQLAENTRN TVELGSSVES ITNSGGRSLD 180 NDRSVDDTAL KLGYVLHLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.1	9e-47	MIKC_MADS family protein