PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY11603.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

C2H2

Protein Properties

Length: 256aa MW: 28891.9 Da PI: 6.6285

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY11603.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.8	0.00035	86	108	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C + Fs++ L H++ H TEY11603.1 86 FTCSFCWREFSTSQALGGHQNAH 108 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 256 aa Download sequence
MASLEPCHSE ASNISVTSKN NHAIKEEEDE EDESGTKHET MPRVVLDLGP ANNEARDKGN 60 PNSPKLHELN LFNPSDDPKP SKSKTFTCSF CWREFSTSQA LGGHQNAHKQ ERALAKHRHN 120 MVDLTAAGPD AHPPMQGYSY YPYSTHNYSF LRSHGVRAQS NMIHPKPYSY HHAPSQYAYS 180 VPREKMPRPY LIDPSPSTPD YALKLEIFQP RDYKFNFGVI NPNSSTRTNE GDDNRLRLGN 240 VDDGKDDLGL DLDLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01860.1	2e-18	C2H2 family protein