PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY11882.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

CO-like

Protein Properties

Length: 369aa MW: 40873.2 Da PI: 5.0463

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY11882.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.6	8.9e-07	3	41	5	37
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......H 37 C+++ ++ +C++++ lC +C ++ H+ H TEY11882.1 3 ECELCRAVRAMVYCKSDGAALCLKCDSYVHSAnavslrH 41 7****99*******************656666663 PP
2	CCT	59.5	1.1e-20	311	354	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R++a++RY+ K+ktR F K+irY sRKa+A++R+RvKGrFvk+ TEY11882.1 311 RDKAKMRYNAKKKTRTFGKQIRYVSRKARADTRKRVKGRFVKSG 354 899**************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MAECELCRAV RAMVYCKSDG AALCLKCDSY VHSANAVSLR HLHSLICDRC FSEPAVVRCL 60 DEKLSLCEAC DSDGCCQSRR AKHNFYNGCP SVAELYKMWP LTLEPEHEFG GNGNDNENEI 120 LPFGTWPIPS PPPPPPPPKF LPSTYGRECD IMFFESGLEK NCGESMKDLL ITQENEDMCS 180 VDIDGMPLSF GSGYEMFQNT QARFPCDDGG LTALLLENNN SMTESNITHE ASMPAQHDCI 240 GLQPPSLMQG MSPPDISLGF GANGQGSPSL PLIKGESSVS EYQDCGLSPL FLTGDSRWDS 300 NFEAMSSPQA RDKAKMRYNA KKKTRTFGKQ IRYVSRKARA DTRKRVKGRF VKSGESYEYD 360 PEGALYYQA

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MAECELCRAV RAMVYCKSDG AALCLKCDSY VHSANAVSLR HLHSLICDRC FSEPAVVRCL  60
DEKLSLCEAC DSDGCCQSRR AKHNFYNGCP SVAELYKMWP LTLEPEHEFG GNGNDNENEI  120
LPFGTWPIPS PPPPPPPPKF LPSTYGRECD IMFFESGLEK NCGESMKDLL ITQENEDMCS  180
VDIDGMPLSF GSGYEMFQNT QARFPCDDGG LTALLLENNN SMTESNITHE ASMPAQHDCI  240
GLQPPSLMQG MSPPDISLGF GANGQGSPSL PLIKGESSVS EYQDCGLSPL FLTGDSRWDS  300
NFEAMSSPQA RDKAKMRYNA KKKTRTFGKQ IRYVSRKARA DTRKRVKGRF VKSGESYEYD  360
PEGALYYQA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21880.1	2e-74	CO-like family protein