PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY12168.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 254aa MW: 29685.7 Da PI: 10.057

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY12168.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	97.3	6.5e-31	25	74	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+++fs++g+lyey+ TEY12168.1 25 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSTRGRLYEYA 74 79***********************************************8 PP
2	K-box	90.5	3.1e-30	113	199	14	100
K-box 14 aeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + +qqe++kL+++i+++q+++R+llGe+++++ lkeL+++e ++ek++++iR+kKne+l+++ie +qk+e el+++n++Lr+k+ e TEY12168.1 113 KKFYQQEATKLRRQIREIQNSNRQLLGEGVSNMPLKELRNMEGKVEKAISRIRTKKNEMLFAEIELMQKRELELHNANMYLRAKIGE 199 5789********************************************************************************965 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MEFPSQESES SNSLRKNGRG KIQIKRIENT TNRQVTFCKR RNGLLKKAYE LSVLCDAEVA 60 LVVFSTRGRL YEYANNSVRA TIDRYKKATI DSSNTMSTSE ANTQAIRHFN GLKKFYQQEA 120 TKLRRQIREI QNSNRQLLGE GVSNMPLKEL RNMEGKVEKA ISRIRTKKNE MLFAEIELMQ 180 KRELELHNAN MYLRAKIGES ERAQQQMNMM NQEYEQPSMS SHNYDVRNFL PVNLLQPEHD 240 RHYSCQDQTP LQLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58780.1	1e-104	MIKC_MADS family protein