PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY12298.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 207aa    MW: 23209.8 Da    PI: 10.4449
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY12298.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF71.85.8e-231967149
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                k ie++  r+vtfskRr+g++KKA ELSvLC++++a+iifs  g+ y +
  TEY12298.1 19 KLIEDENARTVTFSKRRAGLFKKATELSVLCGTQIALIIFSLGGRAYSF 67
                569**************************************99999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MAPPQGKKKS QGRRKIEMKL IEDENARTVT FSKRRAGLFK KATELSVLCG TQIALIIFSL  60
GGRAYSFGHP DVESIIGRFF NKNPTATVPE SSSSSRYRTA MLQEMKEQFD GKSQELETKK  120
KRGKEIEAAL ESSSFHTTDE ELDGLDFEQL RQLRGKLVKM RDEMRRLANA NAYAVANVPP  180
MPVPMLNLAQ VAKSRGASMI PSDWLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.18e-33M-type_MADS family protein