PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY12347.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family TCP
Protein Properties Length: 430aa    MW: 46255.7 Da    PI: 8.4776
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY12347.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP126.13.7e-39682242137
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................ssssaseceaesssssasn 84 
                  g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+d++sk++eWLl++a  +i el+                  s             s+a++
  TEY12347.1  68 SGGKDRHSKVLTSKGLRDRRVRLSVNTAIQFYDLQDRLGVDQPSKAVEWLLKAAASSIEELPPMitpfpdtpkqlsdekrS-------------STAAS 153
                 689************************************************************977665444433333331.............22221 PP

         TCP  85 sssg....................kaaksaakskksqksaasalnlak.esrakarararertrekmriknkln 137
                    +                    +  ks+a+s+ s++s+ s l+l++ esr kar+ra+er +ek + +++ln
  TEY12347.1 154 ---DhlcfdsgevnldggdlnysqQVTKSSACSSTSETSKGSGLSLSRsESRIKARERAKERVAEKEKDSTHLN 224
                 ...12234445555666666677555555669999*******************************99888765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    
MEVDNQIQCK FPRISNGSAA KLRRARMDDE EEEGDKKRGN AGGVDLGCGG GRFYGWPASR  60
IVRVSRASGG KDRHSKVLTS KGLRDRRVRL SVNTAIQFYD LQDRLGVDQP SKAVEWLLKA  120
AASSIEELPP MITPFPDTPK QLSDEKRSST AASDHLCFDS GEVNLDGGDL NYSQQVTKSS  180
ACSSTSETSK GSGLSLSRSE SRIKARERAK ERVAEKEKDS THLNPISHTT SFTELLSGGI  240
GNVSNNSTSP NNSNAAAAPR HWSSTPMDYF TSGAARPAQI HLPANPYTSA VASPLFSIAD  300
HHHPELQHFS FVPDHLIPVV NANNNNSGSG SSSSIEYNFN FSISSSANSS GLDHGGFNRG  360
TLQSNSSSPS LLPHLQRYSD GSAPSFFLGT AETQHQFLSG YDPRGLQLCY GDAHASSGRH  420
SAQRGGKSKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18390.15e-40TCP family protein