PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY12403.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 132aa    MW: 14754.1 Da    PI: 10.5952
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY12403.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF633.4e-201966249
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                +ie ks  qv f+kRr g++ KA ELS+LC+aeva+++ s+ +kly +
  TEY12403.1 19 KIEKKSSLQVAFTKRRGGLFRKATELSILCGAEVAILVQSPAQKLYAF 66
                699*******************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MENSNGKKTL GRRKIPMRKI EKKSSLQVAF TKRRGGLFRK ATELSILCGA EVAILVQSPA  60
QKLYAFGHPS VAALIDRIDP IEAAMKMLEA EKRRSTEKEI KGGDQAAFSS NQVKINDHII  120
PTYTLDQIWG RD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.19e-27M-type_MADS family protein