PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY12423.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 78aa    MW: 8992.33 Da    PI: 10.6614
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY12423.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF102.21.9e-321464151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+++fss+g+lyeys+
  TEY12423.1 14 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSN 64
                79***********************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    
MDERKNGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL VVFSSRGRLY  60
EYSNNRSVVM VGNRSVHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18960.17e-40MIKC_MADS family protein