PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY12460.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family Trihelix
Protein Properties Length: 315aa    MW: 34782.6 Da    PI: 10.5978
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY12460.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix47.25.9e-1538127187
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                 +W+++ +++Li+a       l+rg+l++++W+ev++++   ++ +++r+ +qCk++++  +k+yk +k  + + + +  s +p+f++l+a
  TEY12460.1  38 CWSEEATRTLIDAWGAHYLGLNRGNLRQQQWREVADAVnaaHASKLRRTDVQCKNRIDTTKKKYKIEKSKSLQSNGRYASPWPHFHSLDA 127
                 7*************************************9999999**********************99999988889999******985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MMTFPPLYCQ ILSIPDSPSP PPPPPPSKSP AFPGREDCWS EEATRTLIDA WGAHYLGLNR  60
GNLRQQQWRE VADAVNAAHA SKLRRTDVQC KNRIDTTKKK YKIEKSKSLQ SNGRYASPWP  120
HFHSLDALIG DSFSKSAAAA GNKNHRRKIS PPPEISPSPS PSPSPEPISG NRKISPAINR  180
SPLLRLPWSV PVGPRSKRSG PGGVTERNFS VMAAAAAAME AGRDEEYGDS GLGGGRPAAS  240
AKRRKKAVTA TGRRDGYRML AAAIMSLGET YEKVEVAKQR QMVEFEKQRM QFAKDLELLR  300
AQVQLDNLKH FPKYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.18e-31Trihelix family protein