PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TEY12951.1
Organism
Salvia splendens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace
Family M-type_MADS
Protein Properties Length: 148aa    MW: 16878.3 Da    PI: 9.7042
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TEY12951.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF58.77.3e-191157349
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                ien + rq t++k ++gi+KKA EL vLC+++va+i+f+++g+   +
  TEY12951.1 11 IENPTSRQLTYTKHKEGIIKKAGELAVLCGTDVALIMFAPSGRPASF 57
                9****************************************986666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MGRKKLTMRL IENPTSRQLT YTKHKEGIIK KAGELAVLCG TDVALIMFAP SGRPASFASN  60
GRIEDILLRF VDRPDELRGG PINHEEELEE KLDKLTRKQR ESQEKMRYYE PNVEKTNSAL  120
EAGVYQQFLT NPDIKGQTAR QSTLSRKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77950.21e-24MIKC_MADS family protein