PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TEY13293.1

Organism

Salvia splendens

Taxonomic ID

180675

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salvia; Calosphace; core Calosphace

Family

MIKC_MADS

Protein Properties

Length: 226aa MW: 25815.3 Da PI: 10.2904

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TEY13293.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	44.5	1.9e-14	26	54	1	29
S---SHHHHHHHHHHHHHHHHHHHHHHHH CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSv 29 k+i+n + rqvtfskRr+g++KKA ELS+ TEY13293.1 26 KKIDNLTTRQVTFSKRRKGLFKKARELSI 54 68**************************8 PP
2	K-box	29.6	3e-11	134	195	22	83
K-box 22 akLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkk 83 kL + + +L e+++l Ge L+ Lsl L +Le+ +e ++++iR++K+ l+e+ +l + TEY13293.1 134 GKLSRHLMELSIELKQLEGEHLQGLSLASLIKLEKLIEGGMSRIRKTKEFKLMEENARLNTQ 195 68999999*****************************************9999998877655 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
MCDVIKYYLC LFLGCSKMVR QKIEIKKIDN LTTRQVTFSK RRKGLFKKAR ELSISAMLRL 60 PLLFSQPPAN SSTTLPQGFL SSLLLSLSLS HTHTHTHREK YDCMMQIIQR HDHQTEFKLL 120 KQPPLHIQGS DGLGKLSRHL MELSIELKQL EGEHLQGLSL ASLIKLEKLI EGGMSRIRKT 180 KEFKLMEENA RLNTQPIEKS SKRNAFDLGI PPISDSNCSD TFLKLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22540.2	1e-24	MIKC_MADS family protein